Mechanistic role of ergosterol in membrane rigidity and cycloheximide resistance in Saccharomyces cerevisiae

Mutants of Saccharomyces cerevisiae defective in the late steps of ergosterol biosynthesis are viable but accumulate structurally altered sterols within the plasma membrane. Despite the significance of pleiotropic abnormalities in the erg mutants, little is known about how sterol alterations mechanically affect the membrane structure and correlate with individual mutant phenotypes. Here we demonstrate that the membrane order and occurrence of voids are determinants of membrane rigidity and hypersensitivity to a drug. Among five ergΔ mutants, the erg2Δ mutant exhibited the most marked sensitivity to cycloheximide. Notably, measurement of time-resolved anisotropy indicated that the erg2Δ mutation decreased the membrane order parameter (S), and dramatically increased the rotational diffusion coefficient (D_w) of 1-[4-(trimethylamino)pheny]-6-phenyl-1,3,5-hexatriene (TMA-DPH) in the plasma membrane by 8-fold, providing evidence for the requirement of ergosterol for membrane integrity. The IC₅₀ of cycloheximide was closely correlated with S/D_w in these strains, suggesting that the membrane disorder and increasing occurrence of voids within the plasma membrane synergistically enhance passive diffusion of cycloheximide across the membrane. Exogenous ergosterol partially restored the membrane properties in the upc2-1erg2Δ strain. In this study, we describe the ability of ergosterol to adjust the dynamic properties of the plasma membrane, and consider the relevance of drug permeability.     

肟菌酯与戊唑醇不同配比对白菜黑斑病菌的毒力测定

采用孢子萌发法进行了肟菌酯与戊唑醇不同配比组合在室温条件下对白菜黑斑病菌的毒力测定。结果表明：随着2种药剂不同配比组合浓度的提高对病菌孢子萌发抑制作用增强,以质量浓度为16．2mg／L效果最好。肟菌酯与戊唑醇配比为0．5：1时的共毒系数为127．62,增效作用显著。     

Measuring and controlling data quality in biological assemblage surveys with special reference to stream benthic macroinvertebrates

1. Biological assemblage surveys primarily aim to characterise species composition and relative abundance at one or more spatial or temporal scales. Data interpretation and conclusions are dependent on how well samples characterise the assemblage of interest. 2. Conventional measures of data quality, e.g. standard deviations or coefficients of variation, were designed for single variable estimation, and they are either insufficient or invalid for assessing the quality of data describing entire assemblages. Similarity indices take species composition and relative abundance into account and may be used to effectively measure and control the quality of data used to characterise assemblage structure. 3. The average Jaccard coefficient (JC) calculated across multiple pairs of replicate samples, i.e. autosimilarity JC (AJC), is conceptually and numerically related to the average coefficient of variation in the densities of all species recorded, a measure of sampling precision, and to the proportion of total species richness sampled, a measure of sampling accuracy. 4. We explored how AJC can be used to assess the effect of different potential sources of error on the quality of assemblage survey data, including the sampling effort used both within regions and at individual sites, the individuals collecting samples, sub‐sampling procedures, and consistency of taxon identification. 5. We found that the autosimilarity‐based approach overcomes most weaknesses associated with conventional measures of data quality and can be used to effectively measure and control the quality of assemblage survey data.     

Relationship between Recrystallization Rate of Ice Crystals in Sugar Solutions and Water Mobility in Freeze-Concentrated Matrix

To better understand the relation between recrystallization rate and water mobility in freeze-concentrated matrix, isothermal ice recrystallization rates in several sugar aqueous solutions and self-diffusion coefficients of water component in corresponding freeze-concentrated matrix were measured. The sugars used were fructose, glucose, maltose, and sucrose. The sugar concentrations and temperature were varied so that ice contents for all samples were almost equal. Neither recrystallization rates nor diffusion coefficients depended uniformly on temperature. The recrystallization rates increased with increasing the diffusion coefficients, and a direct relationship was found between recrystallization rate and diffusion coefficient. This indicated that self-diffusion coefficient of water component in freeze-concentrated matrix is a useful parameter for predicting and controlling recrystallization rate in sugar solutions relevant to frozen desserts.     

The effect of seed freezing on morphological characteristics of four pink species

The effects of nondeep (?10°C) and deep (?196°C) seed freezing on the morphological characteristics of four pink species were studied. As a rule, various regimes of seed freezing weakly affected plant growth and development. Relatively stable traits (flower diameter, the number of stem nodes, and root length) did not change. Reproductive shoots became slightly shorter, and the pattern of their distribution changed. The number of variable traits (the number of vegetative shoots and the number of flowers) was reduced. However, in the following year, the number of flowers was restored. Characteristics valuable for cryopreservation (the number of fruits and seed germinability) were essentially unchanged. Some stimulatory effects of seed freezing were noted: enhanced seed germination under unfavorable conditions and an increased upper limit of some indices, including the number of reproductive organs.     

Changes in the spectral power and coherence of the EEG alpha rhythm in humans performing grasp efforts by the right and left arm

We compared changes in the EEG indices in healthy dextral volunteers performing static force grasps by the arm. Three test modes were used: (i) performance of two successive grasps by the dominant (right) arm (test A), (ii) performance of two successive grasps by the subdominant (left) arm (test B), and (iii) performance of the grasps first by the right arm and then by the left arm (test C). Fourteen, six, and nine persons took part in tests A–C, respectively. In the course of grasps performed by the right and left arms, bilateral increases in synchronization within the alpha 1 and alpha 2 ranges were frequently observed in occipital regions in both the first and repeated grasps (P < 0.05). Consecutive grasps by the right arm were accompanied by clear desynchronization in a few anterior and central leads. Alpha 2 desynchronization was observed in both realizations of the left-arm grasps (test B) performed by some subjects, but intragroup modifications were not significant in this case. The coherence coefficients of the alpha 2 rhythm in most cases increased for symmetric leads from the right and left hemispheres in the course of grasps by both the right and left hands. The effect of intensification of interhemisphere links was manifested in the anterior and central cortical regions; this fact showed that interhemisphere interaction increases in the course of the static effort. Changes in the coherence coefficients for the alpha 2 range in the performance of the grasp efforts by the right arm and the left arm were most clear in the posterotemporal (P = 0.02), parietal (P = 0.05), and anterofrontal (P = 0.06) lead pairs. Thus, we demonstrated the dependence between the side of performance of the muscle effort in the mode close to isometric and lateralization of the EEG modifications. Neirofiziologiya/Neurophysiology, Vol. 38, No. 3, pp. 235–238, May–June, 2006.     

Application of Rep-PCR fingerprint in rapid identification of beer-spoilage bacteria

The application potential of rep-PCR in typing beer-spoilage isolates was studied. The effects of different factors, including DNA templates and primers, on the quality and reproducibility of fingerprints were investigated. The CATB protocol was shown to be the feasible method for DNA extraction. Primers BOXA1R and (GTG)₅ were used in rep-PCR, and the PCR products were sequenced to identify strains isolated from two breweries. Rep-PCR fingerprint profiles were obtained using GelCompar II software. Cluster analysis showed that the isolates belonging to Lactobacillus brevis, L. buchneri, L. casei/paracasei, and L. plantarum are divided into 2 or 3 subgroups. In addition, the two rep-PCR fingerprint profiles complemented each other in typing these isolates. By combining the similarity coefficient cut-off (SCC) of species, 9 unknown isolates were rapidly identified using both fingerprint databases. The results indicate that rep-PCR is a simple, reliable, and promising method for the rapid identification of beer-spoilage bacteria.     

Molecular dynamics simulation of diffusion of hydrogen in binary hydrogen–tetrahydrofuran hydrate

The binary structure II hydrogen–tetrahydrofuran (THF) hydrate was studied with molecular dynamics simulation. The simulations were carried out at 300, 310 K and 10.1 MPa, and with various contents of hydrogen and THF. The migrations of hydrogen molecules from cage to cage were observed. The migration process of hydrogen was also analysed, and the diffusion coefficients of hydrogen in the hydrate were calculated. The calculated diffusion coefficients qualitatively agreed with the experimental data. Double and quintet occupancies of hydrogen molecules were observed in the small and large cages, respectively, without changing the hydrate structure.     

Theoretical study of the intermolecular potential energy and second virial coefficient in the mixtures of CH4 and Kr gases: a comparison with experimental data

The intermolecular potential energy surface (IPS) in the mixtures of CH₄–Kr gases from ab initio calculations has been explored. The ab initio calculation was performed at the second-order Møller–Plesset perturbation theory (MP₂), with the 6-311+G(2df,2pd) basis set, for three relative orientations of two CH₄–Kr molecules as a function of CH₄–Kr separation distance. In this work, the IPS, U(r), of the CH₄–Kr complex has been investigated, where the vertex (V), edge (E) and face (F) of CH₄ approaches to Kr have been considered. Then, adjustable parameters of the Lennard-Jones and Buckingham potential energy function are fitted to the ab initio MP2/6-311+G(2df,2pd) interaction energies for three different orientations. Assuming a given set of parameters, we theoretically obtained second virial coefficients for the CH₄–Kr system, and compared with the experimental data at different temperatures. Trivial differences can be observed between the experimental and computational results.